STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2213doxX-like family protein. (142 aa)    
Predicted Functional Partners:
mdtA_2
RND_mfp: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.724
bepE
acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.648
yadA_1
Coiled stalk of trimeric autotransporter adhesin family protein.
  
     0.608
DR95_2804
Secretory lipase family protein.
  
    0.600
soxR
soxR: redox-sensitive transcriptional activator SoxR.
  
  
 0.596
cysM
cysM: cysteine synthase B.
   
 
 0.593
DR95_878
Aluminum activated malate transporter family protein.
  
     0.585
DR95_3279
Major Facilitator Superfamily protein.
 
     0.584
sodA
Superoxide dismutase Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.577
cysW
permease_CysW: sulfate ABC transporter, permease protein CysW.
      
 0.565
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: medium (44%) [HD]
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