Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DR95_2242Methyltransferase domain protein. (274 aa)    
Predicted Functional Partners:
DR95_2245
Periplasmic binding family protein.
 
 
   0.939
nadC
Hypothetical protein; Quinolinate phosphoribosyl transferase, N-terminal domain protein; Belongs to the NadC/ModD family.
 
     0.898
DR95_2243
ABC transporter family protein.
 
     0.867
DR95_2244
ABC 3 transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.833
cirA_2
tonB dependent receptor family protein.
 
     0.766
DR95_1849
Putative oxidoreductase.
  
     0.564
DR95_2649
Dolichyl-phosphate-mannose-mannosyltransferase family protein.
 
     0.556
DR95_245
Hypothetical protein.
  
     0.516
DR95_1883
Bacterial Ig-like domain family protein.
  
    0.471
gntR
HTH-type transcriptional regulator gntR.
       0.470
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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