Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DR95_2244ABC 3 transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (332 aa)    
Predicted Functional Partners:
DR95_2243
ABC transporter family protein.
 
 
 0.976
DR95_2245
Periplasmic binding family protein.
 
 
 0.955
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.937
fhuC_1
ABC transporter family protein.
 
 
 0.903
DR95_3442
Hypothetical protein.
 
 
 0.856
hmuT_1
Hypothetical protein.
 
 
 0.856
hmuT
Hemin-binding periplasmic protein hmuT.
 
 
 0.837
DR95_2242
Methyltransferase domain protein.
 
     0.833
btuF
Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
 
 0.821
yusV
ABC transporter family protein.
 
 
 0.801
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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