STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2250GDSL-like Lipase/Acylhydrolase family protein. (410 aa)    
Predicted Functional Partners:
DR95_2251
Hypothetical protein.
 
     0.952
patA
MBOAT, membrane-bound O-acyltransferase family protein; Belongs to the membrane-bound acyltransferase family.
    0.939
DR95_1883
Bacterial Ig-like domain family protein.
  
 
 0.779
DR95_3673
Bacterial Ig-like domain family protein.
  
 
 0.714
DR95_1283
Hypothetical protein.
  
     0.663
tetR
Tetracycline repressor protein class H.
  
     0.662
DR95_1562
SWIM zinc finger family protein.
  
     0.651
DR95_1558
HEAT repeats family protein.
  
     0.642
DR95_3118
Sel1 repeat family protein.
  
     0.633
DR95_1521
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
  
 
 0.625
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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