STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2253mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein. (264 aa)    
Predicted Functional Partners:
DR95_1865
Hypothetical protein.
  
     0.578
agaC
PTS system sorbose-specific iic component family protein.
      
 0.565
fliL
Flagellar basal body-associated FliL family protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
 
 0.510
tusA_1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
     0.499
cyaA
Adenylate cyclase, class-I family protein; Belongs to the adenylyl cyclase class-1 family.
      
 0.480
rne
Ribonuclease, Rne/Rng family domain protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
      
 0.478
DR95_2250
GDSL-like Lipase/Acylhydrolase family protein.
       0.465
DR95_2251
Hypothetical protein.
       0.465
patA
MBOAT, membrane-bound O-acyltransferase family protein; Belongs to the membrane-bound acyltransferase family.
       0.465
dmsC_1
DMSO reductase anchor subunit family protein.
  
     0.464
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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