STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwlKD-alanyl-D-alanine carboxypeptidase family protein. (129 aa)    
Predicted Functional Partners:
DR95_2266
Rhs_assc_core: RHS repeat-associated core domain protein.
 
     0.815
DR95_2262
Putative membrane protein.
       0.775
DR95_2264
Hypothetical protein.
       0.773
DR95_2265
Hypothetical protein.
       0.773
DR95_2261
Hypothetical protein; Insecticide toxin TcdB middle/C-terminal region family protein.
 
     0.672
spvB
Virulence plasmid 65kDa B family protein.
 
     0.568
DR95_2259
Virulence plasmid 28.1kDa A family protein.
 
     0.492
DR95_3504
P22_AR N-terminal domain protein.
 
     0.479
hemR_3
tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein.
  
     0.424
shlB
Hemolysin transporter protein shlB.
  
     0.403
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.