STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdA(R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha. (413 aa)    
Predicted Functional Partners:
hgdC
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
 
 0.988
hgdB
(R)-2-hydroxyglutaryl-CoA dehydratase subunit beta.
 
  
 0.965
fldA_1
coA-transferase III family protein; Belongs to the CoA-transferase III family.
 
     0.888
acdA
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
   
 0.690
DR95_2286
Citrate transporter family protein.
 
     0.660
lcfB_1
AMP-binding enzyme family protein.
       0.505
dmpI
Taut: 4-oxalocrotonate tautomerase enzyme family protein.
      
 0.478
trpG
Anthranilate synthase component II.
      
 0.476
etfA_1
Electron transfer flavodomain protein.
 
     0.448
trpD
Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
      
 0.443
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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