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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vP5 domain protein. (134 aa)    
Predicted Functional Partners:
DR95_235
Holin_lambda: phage holin, lambda family.
       0.782
DR95_237
Bacteriophage Rz lysis family protein.
       0.782
DR95_238
Hypothetical protein.
       0.554
DR95_2796
Fibronectin type III domain protein.
  
     0.504
DR95_34
Baseplate J-like family protein.
 
     0.504
DR95_36
Phage Tail Collar domain protein.
 
    0.490
DR95_1149
Fibronectin type III domain protein.
  
     0.477
DR95_1277
Putative gp08 W.
 
     0.461
DR95_1279
Putative gp10 V.
 
     0.460
DR95_16
portal_PBSX: phage portal protein, PBSX family.
  
     0.434
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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