STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlpEnlpE N-terminal domain protein. (225 aa)    
Predicted Functional Partners:
cpxA
Sensor protein CpxA.
     
 0.956
cpxP
LTXXQ motif family protein.
  
   
 0.830
qseG
yfhG lipofamily protein.
  
     0.703
DR95_1180
Hypothetical protein.
  
     0.692
DR95_3058
Hypothetical protein.
  
     0.666
fepE
Chain length determinant family protein.
  
     0.602
hpmA
Hemolysin.
  
     0.583
ycdZ
Inner membrane protein ycdZ.
  
     0.558
cpxR
Transcriptional regulatory protein CpxR.
      
 0.557
hicB
Hypothetical protein.
  
     0.544
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.