Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
exuRBacterial regulatory s, lacI family protein. (734 aa)    
Predicted Functional Partners:
ugpA
Binding--dependent transport system inner membrane component family protein.
  
 
 0.956
lacG
Binding--dependent transport system inner membrane component family protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 
 0.922
ugpC_1
ABC transporter family protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
 
 0.855
fbpC
ABC transporter family protein.
  
 
 0.855
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM.
   
 
 0.828
DR95_3153
Sulfatase family protein.
  
     0.761
DR95_384
Hypothetical protein.
  
     0.753
DR95_385
phageSPP1_gp7: phage head morphogenesis, SPP1 gp7 family domain protein.
  
     0.739
DR95_3673
Bacterial Ig-like domain family protein.
  
   
 0.732
DR95_1903
rTX-family protein.
  
  
 0.720
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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