Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
norWNitric oxide reductase FlRd-NAD(+) reductase; Belongs to the FAD-dependent oxidoreductase family. (384 aa)    
Predicted Functional Partners:
norV
Anaerobic nitric oxide reductase flavorubredoxin.
  
 0.994
fdhF_1
Fdh-alpha: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.902
DR95_2566
Fdh-alpha: formate dehydrogenase, alpha subunit.
    
 0.899
nirD
Nitrite reductase [NAD(P)H] small subunit.
 
 0.862
ric
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
     
 0.714
yobA
Protein YobA.
    
   0.680
DR95_3386
Hypothetical protein.
  
    0.641
norR
Anaerobic nitric oxide reductase transcription regulator norR.
 
   
 0.639
nucA
Nuclease.
   
 
 0.588
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   0.587
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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