Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dmsD_2Nitrate reductase delta subunit. (189 aa)    
Predicted Functional Partners:
dmsA
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.875
dmsA_3
dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.798
dmsA-2
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.739
dmsB-2
DMSO_dmsB: dimethylsulfoxide reductase, chain B.
 
    0.733
dmsA_2
dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.733
dmsC_3
DMSO reductase anchor subunit family protein.
 
  
 0.730
dmsC_1
DMSO reductase anchor subunit family protein.
 
  
 0.728
dmsC_2
DMSO reductase anchor subunit family protein.
 
  
 0.671
dmsB-4
DMSO_dmsB: dimethylsulfoxide reductase, chain B.
 
    0.545
DR95_785
DMSO reductase anchor subunit family protein.
 
  
 0.539
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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