STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dmsC_3DMSO reductase anchor subunit family protein. (299 aa)    
Predicted Functional Partners:
dmsA
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.921
dmsC_2
DMSO reductase anchor subunit family protein.
  
  
  0.888
dmsC_1
DMSO reductase anchor subunit family protein.
  
  
  0.879
dmsB-2
DMSO_dmsB: dimethylsulfoxide reductase, chain B.
 
    0.854
DR95_1746
DMSO reductase anchor subunit family protein.
  
  
  0.846
DR95_786
4Fe-4S binding domain protein.
 
   
 0.804
DR95_3673
Bacterial Ig-like domain family protein.
  
     0.760
DR95_1903
rTX-family protein.
  
     0.759
DR95_3103
O-Antigen ligase family protein.
  
     0.755
DR95_3279
Major Facilitator Superfamily protein.
  
     0.753
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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