Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ddpB | ddpC | DR95_637 | DR95_636 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.996 |
ddpB | dppC | DR95_637 | DR95_2702 | Binding--dependent transport system inner membrane component family protein. | Dipeptide transport system permease protein dppC. | 0.858 |
ddpB | gsiA_2 | DR95_637 | DR95_2622 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.826 |
ddpB | gsiC | DR95_637 | DR95_2318 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.924 |
ddpB | gsiD | DR95_637 | DR95_2621 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.852 |
ddpB | nikA | DR95_637 | DR95_2619 | Binding--dependent transport system inner membrane component family protein. | nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein. | 0.708 |
ddpB | oppF_3 | DR95_637 | DR95_2623 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.790 |
ddpC | ddpB | DR95_636 | DR95_637 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.996 |
ddpC | dppB | DR95_636 | DR95_2701 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.853 |
ddpC | gsiA_2 | DR95_636 | DR95_2622 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.977 |
ddpC | gsiC | DR95_636 | DR95_2318 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.984 |
ddpC | nikA | DR95_636 | DR95_2619 | Binding--dependent transport system inner membrane component family protein. | nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein. | 0.748 |
ddpC | nikB | DR95_636 | DR95_2620 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.857 |
ddpC | oppF_3 | DR95_636 | DR95_2623 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.950 |
dppB | ddpC | DR95_2701 | DR95_636 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.853 |
dppB | dppC | DR95_2701 | DR95_2702 | Binding--dependent transport system inner membrane component family protein. | Dipeptide transport system permease protein dppC. | 0.996 |
dppB | gsiA_2 | DR95_2701 | DR95_2622 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.811 |
dppB | gsiD | DR95_2701 | DR95_2621 | Binding--dependent transport system inner membrane component family protein. | Binding--dependent transport system inner membrane component family protein. | 0.851 |
dppB | nikA | DR95_2701 | DR95_2619 | Binding--dependent transport system inner membrane component family protein. | nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein. | 0.695 |
dppB | oppF_3 | DR95_2701 | DR95_2623 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.745 |
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