STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2629Tripartite tricarboxylate transporter receptor family protein. (324 aa)    
Predicted Functional Partners:
DR95_2631
Tripartite tricarboxylate transporter TctA family protein.
  
 0.955
DR95_831
Tripartite tricarboxylate transporter TctA family protein.
  
 0.905
DR95_2630
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.827
DR95_2628
BNR repeat-like domain protein.
 
     0.755
siaT_1
TRAP_fused: TRAP transporter, 4TM/12TM fusion family protein.
  
     0.719
DR95_688
TRAP_TAXI: TRAP transporter solute receptor, TAXI family protein.
  
   
 0.696
yagE
Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
       0.653
DR95_2626
Hypothetical protein.
       0.640
DR95_830
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.598
fggy
FGGY carbohydrate kinase domain-containing protein.
       0.506
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.