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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cra_2Periplasmic binding s and sugar binding domain of LacI family protein. (334 aa)    
Predicted Functional Partners:
gntR_1
Periplasmic binding s and sugar binding domain of LacI family protein.
  
     0.773
gntR
HTH-type transcriptional regulator gntR.
  
     0.773
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM.
   
 
 0.762
gltB
Glutamine amidotransferases class-II family protein.
    
 
 0.749
exuR
Bacterial regulatory s, lacI family protein.
 
   
 0.715
dmsC_3
DMSO reductase anchor subunit family protein.
  
   
 0.625
DR95_2631
Tripartite tricarboxylate transporter TctA family protein.
       0.600
DR95_2630
Tripartite tricarboxylate transporter TctB family protein.
       0.553
hmp
Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
      
 0.511
DR95_2626
Hypothetical protein.
 
     0.458
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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