Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| arcB | caiD | DR95_1958 | DR95_2271 | Aerobic respiration control sensor protein ArcB. | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. | 0.756 |
| arcB | dctD | DR95_1958 | DR95_2361 | Aerobic respiration control sensor protein ArcB. | Bacterial regulatory, Fis family protein. | 0.693 |
| arcB | rcsC | DR95_1958 | DR95_226 | Aerobic respiration control sensor protein ArcB. | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.999 |
| arcB | tmoT | DR95_1958 | DR95_3437 | Aerobic respiration control sensor protein ArcB. | Bacterial regulatory s, luxR family protein. | 0.647 |
| arcB | ttrA | DR95_1958 | DR95_267 | Aerobic respiration control sensor protein ArcB. | Molybdopterin oxidoreductase Fe4S4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.428 |
| arcB | ttrR | DR95_1958 | DR95_263 | Aerobic respiration control sensor protein ArcB. | Bacterial regulatory s, luxR family protein. | 0.647 |
| arcB | ttrS | DR95_1958 | DR95_264 | Aerobic respiration control sensor protein ArcB. | His Kinase A domain protein. | 0.879 |
| caiD | arcB | DR95_2271 | DR95_1958 | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. | Aerobic respiration control sensor protein ArcB. | 0.756 |
| caiD | rcsC | DR95_2271 | DR95_226 | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.957 |
| caiD | ttrS | DR95_2271 | DR95_264 | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. | His Kinase A domain protein. | 0.713 |
| dctD | arcB | DR95_2361 | DR95_1958 | Bacterial regulatory, Fis family protein. | Aerobic respiration control sensor protein ArcB. | 0.693 |
| dctD | flgD | DR95_2361 | DR95_300 | Bacterial regulatory, Fis family protein. | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.403 |
| dctD | rcsC | DR95_2361 | DR95_226 | Bacterial regulatory, Fis family protein. | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.555 |
| dctD | ttrS | DR95_2361 | DR95_264 | Bacterial regulatory, Fis family protein. | His Kinase A domain protein. | 0.783 |
| flgD | dctD | DR95_300 | DR95_2361 | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | Bacterial regulatory, Fis family protein. | 0.403 |
| flgD | rcsC | DR95_300 | DR95_226 | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.523 |
| flgD | ttrS | DR95_300 | DR95_264 | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | His Kinase A domain protein. | 0.695 |
| rcsC | arcB | DR95_226 | DR95_1958 | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | Aerobic respiration control sensor protein ArcB. | 0.999 |
| rcsC | caiD | DR95_226 | DR95_2271 | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. | 0.957 |
| rcsC | dctD | DR95_226 | DR95_2361 | Sensor kinase protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | Bacterial regulatory, Fis family protein. | 0.555 |
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