Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DR95_2707Beta-lactamase family protein. (336 aa)    
Predicted Functional Partners:
dmpI
Taut: 4-oxalocrotonate tautomerase enzyme family protein.
 
     0.611
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
     
 0.533
DR95_3589
Bacterial regulatory s, tetR family protein.
      
 0.515
ampH
Beta-lactamase family protein.
  
     0.504
yhjD
Inner membrane protein YhjD.
     
 0.453
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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