Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mlr_1FAD binding domain protein. (473 aa)    
Predicted Functional Partners:
amnD
Endoribonuclease L-PSP family protein.
  
    0.638
norW
Nitric oxide reductase FlRd-NAD(+) reductase; Belongs to the FAD-dependent oxidoreductase family.
  
 
 0.547
DR95_2964
Putative exported FKBP-type peptidyl-prolyl cis-trans isomerase.
  
 
   0.508
ddpA
Bacterial extracellular solute-binding s, 5 Middle family protein.
  
     0.490
DR95_3279
Major Facilitator Superfamily protein.
  
    0.488
betI
Transcriptional repressor BetI; Repressor involved in choline regulation of the bet genes.
  
     0.458
DR95_1903
rTX-family protein.
  
     0.455
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.435
DR95_1521
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
 
     0.430
acsC
Cellulose synthase operon C family protein.
  
     0.415
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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