STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_2783major_cap_HK97: phage major capsid protein, HK97 family. (388 aa)    
Predicted Functional Partners:
DR95_2781
portal_HK97: phage portal protein, HK97 family.
 
 
 0.947
DR95_2780
Phage Terminase family protein.
 
     0.926
DR95_2785
Phage head-tail joining family protein.
 
 
 0.909
DR95_2782
proheadase_HK97: phage prohead protease, HK97 family.
 
  
 0.905
DR95_1163
portal_HK97: phage portal protein, HK97 family.
 
 
 0.811
DR95_3508
sm_term_P27: phage terminase, small subunit, P27 family.
 
   
 0.775
DR95_1165
sm_term_P27: phage terminase, small subunit, P27 family.
 
   
 0.769
DR95_1159
Phage head-tail joining family protein.
 
 
 0.762
DR95_1164
Phage Terminase family protein.
 
     0.754
DR95_3507
HNH endonuclease family protein.
 
  
 0.752
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.