Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
eda_1Putative KHG/KDPG aldolase. (213 aa)    
Predicted Functional Partners:
kdgK_3
pfkB carbohydrate kinase family protein.
 
 
 0.989
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.980
gatY
Tag_bisphos_ald: class II aldolase, tagatose bisphosphate family.
    
 0.955
eda
KHG/KDPG aldolase.
  
  
 
0.912
aceA
Isocit_lyase: isocitrate lyase.
     
 0.905
ghrB
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.903
ghrA
Glyoxylate/hydroxypyruvate reductase A.
    
  0.902
aceB
malate_syn_A: malate synthase A; Belongs to the malate synthase family.
     
 0.900
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.840
gap
GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.839
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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