STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgK_3pfkB carbohydrate kinase family protein. (323 aa)    
Predicted Functional Partners:
eda_1
Putative KHG/KDPG aldolase.
 
 
 0.946
gatY
Tag_bisphos_ald: class II aldolase, tagatose bisphosphate family.
  
  
 0.811
yajL_1
DJ-1/PfpI family protein.
       0.782
eda
KHG/KDPG aldolase.
 
 
 0.764
kduD
kduD: 2-deoxy-D-gluconate 3-dehydrogenase.
 0.669
rbsD
rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.563
DR95_2831
Hypothetical protein.
       0.508
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase.
  
    0.501
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.453
ydgJ
Hypothetical protein.
 
  
 0.453
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.