STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgrRHTH-type transcriptional regulator sgrR. (567 aa)    
Predicted Functional Partners:
DR95_906
Hypothetical protein.
  
     0.697
bssS
bssS family protein.
  
     0.689
flgM
flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM.
  
     0.689
tomB
Biofilm formation regulator YbaJ family protein.
  
     0.686
DR95_3058
Hypothetical protein.
  
     0.667
DR95_1084
yniB-like family protein.
  
     0.664
DR95_96
sseB C-terminal domain protein.
  
     0.661
DR95_218
yfaZ family protein.
  
     0.646
yijD
Inner membrane protein yijD.
  
     0.644
uspB
Universal stress protein B.
  
     0.640
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.