STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE1Hypothetical protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein. (147 aa)    
Predicted Functional Partners:
epsF
Type II secretion system (T2SS), F family protein.
 
   
 0.765
gspE
Type II/IV secretion system family protein.
 
  
 0.755
pilQ
Bacterial type II and III secretion system family protein.
 
   
 0.659
DR95_105
Tetratricopeptide repeat family protein.
  
     0.570
ampD
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.
     
 0.561
DR95_3059
Hypothetical protein.
  
     0.480
zapD
Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
 
     0.470
gspO
Type IV leader peptidase family protein; Belongs to the peptidase A24 family.
 
   
 0.460
pilT
pilT_fam: twitching motility family protein.
 
   
 0.456
tfoX
tfoX N-terminal domain protein.
  
   
 0.431
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.