STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apxIBABC transporter family protein. (686 aa)    
Predicted Functional Partners:
hlyD
type_I_hlyD: type I secretion membrane fusion, HlyD family protein.
 
 0.978
prsE
type_I_hlyD: type I secretion membrane fusion, HlyD family protein.
 
 0.775
hlyB
Alpha-hemolysin translocation ATP-binding protein HlyB.
 
    
0.764
viuB
Siderophore-interacting FAD-binding domain protein.
   
   0.763
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
  
0.750
mdlB
Multidrug resistance-like ATP-binding protein MdlB.
 
 
  
0.729
yheI
ABC transporter family protein.
 
 
  
0.719
DR95_2075
Segment 14/17; Putative complete genome.
 
  
 0.680
prtA-3
Secreted protease A.
 
  
 0.656
prtA
Secreted protease A.
 
  
 0.630
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.