Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alaA | lysA | DR95_193 | DR95_3645 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.586 |
alaA | mdaB_2 | DR95_193 | DR95_2996 | Hypothetical protein. | Flavodoxin-like fold family protein. | 0.567 |
dmlR_3 | mdaB_2 | DR95_2995 | DR95_2996 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Flavodoxin-like fold family protein. | 0.466 |
dmlR_3 | ycnE | DR95_2995 | DR95_2994 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Antibiotic biosynthesis monooxygenase family protein. | 0.424 |
kefB | mdaB_2 | DR95_2741 | DR95_2996 | Glutathione-regulated potassium-efflux system protein kefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Flavodoxin-like fold family protein. | 0.857 |
lysA | alaA | DR95_3645 | DR95_193 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Hypothetical protein. | 0.586 |
lysA | mdaB_2 | DR95_3645 | DR95_2996 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Flavodoxin-like fold family protein. | 0.532 |
mdaB_2 | alaA | DR95_2996 | DR95_193 | Flavodoxin-like fold family protein. | Hypothetical protein. | 0.567 |
mdaB_2 | dmlR_3 | DR95_2996 | DR95_2995 | Flavodoxin-like fold family protein. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.466 |
mdaB_2 | kefB | DR95_2996 | DR95_2741 | Flavodoxin-like fold family protein. | Glutathione-regulated potassium-efflux system protein kefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.857 |
mdaB_2 | lysA | DR95_2996 | DR95_3645 | Flavodoxin-like fold family protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.532 |
mdaB_2 | ycnE | DR95_2996 | DR95_2994 | Flavodoxin-like fold family protein. | Antibiotic biosynthesis monooxygenase family protein. | 0.468 |
ycnE | dmlR_3 | DR95_2994 | DR95_2995 | Antibiotic biosynthesis monooxygenase family protein. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.424 |
ycnE | mdaB_2 | DR95_2994 | DR95_2996 | Antibiotic biosynthesis monooxygenase family protein. | Flavodoxin-like fold family protein. | 0.468 |