Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR95_1139 | phrB | DR95_1139 | DR95_3037 | Hypothetical protein. | FAD binding domain of DNA photolyase family protein. | 0.881 |
| DR95_1609 | phrB | DR95_1609 | DR95_3037 | Hypothetical protein. | FAD binding domain of DNA photolyase family protein. | 0.579 |
| DR95_3038 | phrB | DR95_3038 | DR95_3037 | Glycosyl transferase 2 family protein. | FAD binding domain of DNA photolyase family protein. | 0.642 |
| DR95_3038 | proP | DR95_3038 | DR95_3036 | Glycosyl transferase 2 family protein. | Proline/betaine transporter. | 0.634 |
| acpP | infB | DR95_1221 | DR95_3254 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | 0.630 |
| acpP | msbA | DR95_1221 | DR95_1394 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.443 |
| acpP | phrB | DR95_1221 | DR95_3037 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | FAD binding domain of DNA photolyase family protein. | 0.571 |
| acpP | ybeY | DR95_1221 | DR95_1593 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.555 |
| infB | acpP | DR95_3254 | DR95_1221 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.630 |
| infB | msbA | DR95_3254 | DR95_1394 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.468 |
| infB | phrB | DR95_3254 | DR95_3037 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | FAD binding domain of DNA photolyase family protein. | 0.555 |
| infB | sodA | DR95_3254 | DR95_2522 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | Superoxide dismutase Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.479 |
| infB | sodB | DR95_3254 | DR95_1014 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | Superoxide dismutase Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.479 |
| infB | ybeY | DR95_3254 | DR95_1593 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.724 |
| msbA | acpP | DR95_1394 | DR95_1221 | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.443 |
| msbA | infB | DR95_1394 | DR95_3254 | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity). | 0.468 |
| msbA | phrB | DR95_1394 | DR95_3037 | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | FAD binding domain of DNA photolyase family protein. | 0.407 |
| phrB | DR95_1139 | DR95_3037 | DR95_1139 | FAD binding domain of DNA photolyase family protein. | Hypothetical protein. | 0.881 |
| phrB | DR95_1609 | DR95_3037 | DR95_1609 | FAD binding domain of DNA photolyase family protein. | Hypothetical protein. | 0.579 |
| phrB | DR95_3038 | DR95_3037 | DR95_3038 | FAD binding domain of DNA photolyase family protein. | Glycosyl transferase 2 family protein. | 0.642 |
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