Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DR95_30743-beta hydroxysteroid dehydrogenase/isomerase family protein. (345 aa)    
Predicted Functional Partners:
DR95_3076
wecB: UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.972
DR95_3075
rmlD substrate binding domain protein.
 
  
 0.962
DR95_3077
Glycosyl transferases group 1 family protein.
 
  
 0.932
arnB
Beta-eliminating lyase family protein; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
 
  
 0.858
wecE
TDP-4-keto-6-deoxy-D-glucose transaminase family protein; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.839
DR95_3070
Polysaccharide biosynthesis family protein.
  
  
 0.823
DR95_3071
Hypothetical protein.
  
  
 0.744
DR95_3072
Glycosyl transferases group 1 family protein.
  
  
 0.744
DR95_3073
Hypothetical protein.
  
  
 0.741
DR95_3078
cupin_WbuC: cupin fold metallo, WbuC family protein.
  
  
 0.682
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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