STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_3076wecB: UDP-N-acetylglucosamine 2-epimerase. (375 aa)    
Predicted Functional Partners:
DR95_3074
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
 
  
 0.967
DR95_3077
Glycosyl transferases group 1 family protein.
 
  
 0.955
wbpA
Nucleotide sugar dehydrogenase family protein; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.
  
 0.928
DR95_3075
rmlD substrate binding domain protein.
 
  
 0.926
DR95_3070
Polysaccharide biosynthesis family protein.
  
  
 0.846
DR95_3071
Hypothetical protein.
 
  
 0.790
DR95_3073
Hypothetical protein.
  
  
 0.753
DR95_3072
Glycosyl transferases group 1 family protein.
  
  
 0.750
DR95_3069
Putative membrane protein.
       0.661
wzzE
Lipopolysaccharide biosynthesis protein wzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
  
 0.654
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.