STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_3095Putative wabN. (320 aa)    
Predicted Functional Partners:
DR95_3098
Glycosyl transferases group 1 family protein.
 
     0.855
DR95_3097
Glycosyl transferases group 1 family protein.
 
     0.850
rfaF_3
Glycosyltransferase 9 family protein.
  
    0.803
rfaQ
heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III.
 
    0.640
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.633
DR95_3239
ABC-2 type transporter family protein.
  
     0.585
ycdY
Nitrate reductase delta subunit.
  
     0.542
DR95_3100
Glycosyl transferase 2 family protein.
 
   0.518
DR95_3238
ABC-2 type transporter family protein.
  
   
 0.499
DR95_437
Hypothetical protein; Belongs to the UPF0181 family.
  
     0.481
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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