Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR95_2333 | DR95_3119 | DR95_2333 | DR95_3119 | Acetyltransferase domain protein. | Acetyltransferase domain protein. | 0.486 |
DR95_2333 | ecpD_6 | DR95_2333 | DR95_2801 | Acetyltransferase domain protein. | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein. | 0.526 |
DR95_3119 | DR95_2333 | DR95_3119 | DR95_2333 | Acetyltransferase domain protein. | Acetyltransferase domain protein. | 0.486 |
DR95_3119 | ecpD_6 | DR95_3119 | DR95_2801 | Acetyltransferase domain protein. | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein. | 0.417 |
DR95_3119 | gabR | DR95_3119 | DR95_3120 | Acetyltransferase domain protein. | Aminotransferase class I and II family protein. | 0.618 |
DR95_3119 | guaA | DR95_3119 | DR95_499 | Acetyltransferase domain protein. | GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | 0.455 |
DR95_3119 | nphR | DR95_3119 | DR95_2292 | Acetyltransferase domain protein. | Helix-turn-helix domain protein. | 0.470 |
ecpD_6 | DR95_2333 | DR95_2801 | DR95_2333 | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein. | Acetyltransferase domain protein. | 0.526 |
ecpD_6 | DR95_3119 | DR95_2801 | DR95_3119 | Hypothetical protein; Pili assembly chaperone PapD, C-terminal domain protein. | Acetyltransferase domain protein. | 0.417 |
gabR | DR95_3119 | DR95_3120 | DR95_3119 | Aminotransferase class I and II family protein. | Acetyltransferase domain protein. | 0.618 |
gabR | guaA | DR95_3120 | DR95_499 | Aminotransferase class I and II family protein. | GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | 0.503 |
guaA | DR95_3119 | DR95_499 | DR95_3119 | GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Acetyltransferase domain protein. | 0.455 |
guaA | gabR | DR95_499 | DR95_3120 | GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Aminotransferase class I and II family protein. | 0.503 |
nphR | DR95_3119 | DR95_2292 | DR95_3119 | Helix-turn-helix domain protein. | Acetyltransferase domain protein. | 0.470 |