Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccmA-3 | rbsB | DR95_1828 | DR95_1830 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | D-ribose-binding periplasmic protein. | 0.999 |
| ccmA-3 | rbsC | DR95_1828 | DR95_1829 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
| ccmA-3 | rbsD | DR95_1828 | DR95_1827 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.993 |
| ccmA-3 | rbsK-2 | DR95_1828 | DR95_3192 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.414 |
| hisA | rbsK-2 | DR95_1451 | DR95_3192 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.501 |
| ravA | rbsK-2 | DR95_3191 | DR95_3192 | AAA domain family protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.424 |
| ravA | viaA | DR95_3191 | DR95_3190 | AAA domain family protein. | VWA domain containing CoxE-like family protein. | 0.963 |
| rbsB | ccmA-3 | DR95_1830 | DR95_1828 | D-ribose-binding periplasmic protein. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.999 |
| rbsB | rbsC | DR95_1830 | DR95_1829 | D-ribose-binding periplasmic protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
| rbsB | rbsD | DR95_1830 | DR95_1827 | D-ribose-binding periplasmic protein. | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.993 |
| rbsB | rbsK-2 | DR95_1830 | DR95_3192 | D-ribose-binding periplasmic protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.570 |
| rbsC | ccmA-3 | DR95_1829 | DR95_1828 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.999 |
| rbsC | rbsB | DR95_1829 | DR95_1830 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | D-ribose-binding periplasmic protein. | 0.999 |
| rbsC | rbsD | DR95_1829 | DR95_1827 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.994 |
| rbsC | rbsK-2 | DR95_1829 | DR95_3192 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.485 |
| rbsD | ccmA-3 | DR95_1827 | DR95_1828 | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.993 |
| rbsD | rbsB | DR95_1827 | DR95_1830 | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | D-ribose-binding periplasmic protein. | 0.993 |
| rbsD | rbsC | DR95_1827 | DR95_1829 | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
| rbsD | rbsK-2 | DR95_1827 | DR95_3192 | rbsD / FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.871 |
| rbsK-2 | ccmA-3 | DR95_3192 | DR95_1828 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.414 |
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