Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR95_3279Major Facilitator Superfamily protein. (391 aa)    
Predicted Functional Partners:
DR95_3672
Outer membrane efflux family protein.
  
   0.792
DR95_3280
dTDP-4-dehydrorhamnose 3,5-epimerase family protein.
       0.780
DR95_1903
rTX-family protein.
  
    0.775
DR95_3673
Bacterial Ig-like domain family protein.
  
     0.774
DR95_846
Acetyltransferase family protein.
  
    0.774
DR95_1149
Fibronectin type III domain protein.
  
     0.773
DR95_1153
tape_meas_lam_C: phage tail tape measure protein, lambda family.
  
     0.773
ompC
Gram-negative porin family protein.
  
     0.773
DR95_2791
tape_meas_lam_C: phage tail tape measure protein, lambda family.
  
     0.773
DR95_2964
Putative exported FKBP-type peptidyl-prolyl cis-trans isomerase.
  
     0.773
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.