STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfPAIG2-like family protein. (115 aa)    
Predicted Functional Partners:
tamA
Hypothetical protein.
 
   
 0.860
tamB
Hypothetical protein.
 
     0.851
DR95_2705
HAMP domain protein.
  
     0.697
atpI
ATP synthase I chain family protein.
  
     0.687
DR95_1543
cyd_oper_ybgE: cyd operon protein YbgE.
  
     0.686
DR95_661
Hypothetical protein.
  
     0.683
DR95_2605
Enterobacterial Ail/Lom family protein.
  
     0.667
ail-2
Attachment invasion locus protein.
  
     0.665
DR95_2325
Bacterial virulence factor hemolysin family protein.
  
     0.663
DR95_3299
Hypothetical protein; Opacity-associated A N-terminal motif family protein.
  
     0.640
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.