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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zinTMetal-binding protein ZinT. (215 aa)    
Predicted Functional Partners:
rpmE-2
L31: ribosomal protein L31.
  
  
 0.960
DR95_1079
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
 
    0.919
znuA
High-affinity zinc uptake system protein znuA; Belongs to the bacterial solute-binding protein 9 family.
  
 0.912
rpmJ-2
rpmJ_bact: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.782
znuC_1
ABC transporter family protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.743
znuC_2
ABC transporter family protein.
  
  
 0.742
znuB
High-affinity zinc uptake system membrane protein znuB.
  
  
 0.630
mntB_2
ABC 3 transport family protein.
  
  
 0.607
mntB_3
ABC 3 transport family protein.
  
  
 0.607
yjiA
Hypothetical protein.
  
  
 0.506
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.