Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zinTMetal-binding protein ZinT. (215 aa)    
Predicted Functional Partners:
rpmE-2
L31: ribosomal protein L31.
  
  
 0.985
znuA
High-affinity zinc uptake system protein znuA; Belongs to the bacterial solute-binding protein 9 family.
  
 0.934
DR95_1079
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.928
znuC_1
ABC transporter family protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.789
rpmJ-2
rpmJ_bact: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.781
znuC_2
ABC transporter family protein.
  
  
 0.753
znuB
High-affinity zinc uptake system membrane protein znuB.
  
  
 0.669
mntB_2
ABC 3 transport family protein.
  
  
 0.612
mntB_3
ABC 3 transport family protein.
  
  
 0.612
yjiA
Hypothetical protein.
  
  
 0.546
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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