Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DR95_3435Acyltransferase family protein. (240 aa)    
Predicted Functional Partners:
cdsA_2
Cytidylyltransferase family protein.
 
 
  0.994
DR95_3436
CDP-alcohol phosphatidyltransferase family protein.
 
 
 0.963
ynbA
Inner membrane protein ynbA.
 
 
 0.805
ytpA_1
Hypothetical protein.
 
 
 0.800
DR95_1633
Hypothetical protein.
 
    0.748
plsB
plsB: glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.567
plsY
Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.567
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.546
DR95_97
MG2 domain protein; Protects the bacterial cell from host peptidases.
   
    0.443
DR95_3433
CAAX protease self-immunity family protein.
  
    0.415
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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