STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhsC_1Rhs_assc_core: RHS repeat-associated core domain protein. (1538 aa)    
Predicted Functional Partners:
DR95_3581
vgr_GE: Rhs element Vgr family protein.
 
  
 0.843
DR95_3582
Hypothetical protein.
 
    0.843
DR95_3584
Hypothetical protein.
       0.773
hcpA_4
VI_effect_Hcp1: type VI secretion system effector, Hcp1 family protein.
 
  
 0.614
DR95_2964
Putative exported FKBP-type peptidyl-prolyl cis-trans isomerase.
 
 
 0.601
DR95_2807
Hypothetical protein.
 
  
 0.595
DR95_1903
rTX-family protein.
 
  
 0.528
DR95_2814
IV_VI_DotU: type IV/VI secretion system, DotU family domain protein.
 
  
 0.528
DR95_2822
Hypothetical protein.
 
  
 0.520
DR95_2809
Intracellular multiplication and macrophage-killing family protein.
 
  
 0.516
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.