dcuB protein (Proteus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

dcuB

Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. (446 aa)

Predicted Functional Partners:

dcuD_2

0.589

dcuD_4

0.532

ansB

0.529

DR95_668

0.527

dcuD_1

0.491

dcuD_3

0.479

flgH

0.470

Your Current Organism:

Proteus vulgaris

NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR95_668	dcuB	DR95_668	DR95_3597	Hypothetical protein.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.527
DR95_668	dcuD_1	DR95_668	DR95_1771	Hypothetical protein.	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	0.494
DR95_668	dcuD_3	DR95_668	DR95_1460	Hypothetical protein.	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	0.650
ansB	dcuB	DR95_1403	DR95_3597	L-asparaginase 2; Belongs to the asparaginase 1 family.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.529
dcuB	DR95_668	DR95_3597	DR95_668	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	Hypothetical protein.	0.527
dcuB	ansB	DR95_3597	DR95_1403	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	L-asparaginase 2; Belongs to the asparaginase 1 family.	0.529
dcuB	dcuD_1	DR95_3597	DR95_1771	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	0.491
dcuB	dcuD_2	DR95_3597	DR95_1961	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	0.589
dcuB	dcuD_3	DR95_3597	DR95_1460	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	0.479
dcuB	dcuD_4	DR95_3597	DR95_1488	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	Putative cryptic C4-dicarboxylate transporter dcuD.	0.532
dcuB	flgH	DR95_3597	DR95_305	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	0.470
dcuD_1	DR95_668	DR95_1771	DR95_668	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	Hypothetical protein.	0.494
dcuD_1	dcuB	DR95_1771	DR95_3597	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.491
dcuD_2	dcuB	DR95_1961	DR95_3597	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.589
dcuD_3	DR95_668	DR95_1460	DR95_668	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	Hypothetical protein.	0.650
dcuD_3	dcuB	DR95_1460	DR95_3597	dcuC: transporter, anaerobic C4-dicarboxylate uptake C family protein.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.479
dcuD_4	dcuB	DR95_1488	DR95_3597	Putative cryptic C4-dicarboxylate transporter dcuD.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.532
flgH	dcuB	DR95_305	DR95_3597	Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	Anaerobic C4-dicarboxylate transporter dcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.	0.470

Server load: low (38%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About