STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_552Putative nucleotidyltransferase family protein. (259 aa)    
Predicted Functional Partners:
DR95_553
Putative nucleotidyltransferase family protein.
     0.978
rtcB_1
tRNA-splicing ligase RtcB family protein.
 
    0.641
DR95_1559
ATPase associated with various cellular activities family protein.
  
     0.592
rtcB
RNA-splicing ligase RtcB.
 
    0.584
DR95_1673
SPFH domain / Band 7 family protein.
 
  
 0.582
DR95_1561
Von Willebrand factor type A domain protein.
  
     0.571
qseF_3
Sigma-54 interaction domain protein.
 
   
 0.565
DR95_566
HD domain protein.
 
     0.564
DR95_1560
Hypothetical protein.
 
     0.563
kptA
RNA 2'-phosphotransferase, Tpt1 / KptA family protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
     0.550
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
Server load: low (18%) [HD]
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