Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mipAmltA-interacting protein. (250 aa)    
Predicted Functional Partners:
DR95_484
Hypothetical protein.
  
     0.757
ydgH
Protein ydgH.
  
    0.700
DR95_2697
Hypothetical protein.
  
     0.653
DR95_1756
Bacterial chaperone lipo family protein.
  
     0.650
DR95_2691
Hypothetical protein; Dipeptidyl peptidase IV (DPP IV) N-terminal region family protein.
  
    0.643
DR95_2040
Hypothetical protein.
  
     0.629
ail-2
Attachment invasion locus protein.
  
    0.616
matP
Organizer of macrodomain of Terminus of chromosome family protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.582
DR95_2605
Enterobacterial Ail/Lom family protein.
  
    0.565
DR95_3662
Hypothetical protein.
  
     0.549
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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