STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaDPutative glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (294 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.917
pgm
Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific.
   
 
 0.915
crr
Glucose-specific phosphotransferase enzyme IIA component.
     
  0.900
ptsG_1
EIIB_glc: PTS system, glucose-like IIB component domain protein.
     
  0.900
ptsG
PTS system glucose-specific EIICB component.
     
  0.900
malX
EIIB_glc: PTS system, glucose-like IIB component domain protein.
     
  0.900
chbF
6-phospho-beta-glucosidase.
     
  0.900
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
  0.831
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.808
eda
KHG/KDPG aldolase.
    
 0.808
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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