| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR95_3287 | phoU | DR95_3287 | DR95_2658 | Hypothetical protein. | Phosphate transport system regulatory protein PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions. | 0.484 |
| DR95_3287 | ybeZ_1 | DR95_3287 | DR95_672 | Hypothetical protein. | phoH-like family protein. | 0.495 |
| clpX | rpoD | DR95_1805 | DR95_2404 | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.591 |
| clpX | ybeZ_1 | DR95_1805 | DR95_672 | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | phoH-like family protein. | 0.510 |
| crp | rpoD | DR95_2729 | DR95_2404 | Bacterial regulatory s, crp family protein. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.944 |
| crp | ybeZ_1 | DR95_2729 | DR95_672 | Bacterial regulatory s, crp family protein. | phoH-like family protein. | 0.480 |
| flhD | ybeZ_1 | DR95_281 | DR95_672 | Flagellar transcriptional activator family protein; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways. | phoH-like family protein. | 0.478 |
| phoU | DR95_3287 | DR95_2658 | DR95_3287 | Phosphate transport system regulatory protein PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions. | Hypothetical protein. | 0.484 |
| phoU | ybeZ_1 | DR95_2658 | DR95_672 | Phosphate transport system regulatory protein PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions. | phoH-like family protein. | 0.519 |
| rbsB | ybeZ_1 | DR95_1830 | DR95_672 | D-ribose-binding periplasmic protein. | phoH-like family protein. | 0.493 |
| recO | ybeZ_1 | DR95_63 | DR95_672 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | phoH-like family protein. | 0.726 |
| rpoD | clpX | DR95_2404 | DR95_1805 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.591 |
| rpoD | crp | DR95_2404 | DR95_2729 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Bacterial regulatory s, crp family protein. | 0.944 |
| rpoD | ybeY | DR95_2404 | DR95_1593 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.431 |
| rpoD | ybeZ_1 | DR95_2404 | DR95_672 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | phoH-like family protein. | 0.441 |
| tadA | ybeZ_1 | DR95_68 | DR95_672 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | phoH-like family protein. | 0.512 |
| ybeY | rpoD | DR95_1593 | DR95_2404 | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.431 |
| ybeY | ybeZ_1 | DR95_1593 | DR95_672 | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | phoH-like family protein. | 0.865 |
| ybeZ_1 | DR95_3287 | DR95_672 | DR95_3287 | phoH-like family protein. | Hypothetical protein. | 0.495 |
| ybeZ_1 | clpX | DR95_672 | DR95_1805 | phoH-like family protein. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.510 |
