STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
budAAcetolac_decarb: alpha-acetolactate decarboxylase. (275 aa)    
Predicted Functional Partners:
alsS
Acolac_catab: acetolactate synthase, catabolic; Belongs to the TPP enzyme family.
 
 
 0.994
ilvB
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.952
ilvB-2
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.952
ilvN
Acetolactate synthase isozyme 1 small subunit.
     
 0.912
ilvM
Acetolactate synthase isozyme 2 small subunit.
     
 0.901
poxB
Pyruvate dehydrogenase ubiquinone; Belongs to the TPP enzyme family.
 
  
 0.606
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
      
 0.525
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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