Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR95_2187 | DR95_2188 | DR95_2187 | DR95_2188 | Fimbrial family protein. | papC N-terminal domain protein. | 0.958 |
DR95_2187 | elfC_4 | DR95_2187 | DR95_3326 | Fimbrial family protein. | papC N-terminal domain protein. | 0.822 |
DR95_2187 | papC | DR95_2187 | DR95_3003 | Fimbrial family protein. | Outer membrane usher protein papC. | 0.768 |
DR95_2187 | papC-2 | DR95_2187 | DR95_3572 | Fimbrial family protein. | Outer membrane usher protein papC. | 0.789 |
DR95_2187 | papC-3 | DR95_2187 | DR95_72 | Fimbrial family protein. | Outer membrane usher protein papC. | 0.821 |
DR95_2187 | papC_4 | DR95_2187 | DR95_1668 | Fimbrial family protein. | papC N-terminal domain protein. | 0.796 |
DR95_2187 | papD | DR95_2187 | DR95_1667 | Fimbrial family protein. | Chaperone protein papD. | 0.791 |
DR95_2187 | papD-4 | DR95_2187 | DR95_71 | Fimbrial family protein. | Chaperone protein papD. | 0.822 |
DR95_2187 | pmfA | DR95_2187 | DR95_73 | Fimbrial family protein. | Major fimbrial subunit. | 0.737 |
DR95_2188 | DR95_2187 | DR95_2188 | DR95_2187 | papC N-terminal domain protein. | Fimbrial family protein. | 0.958 |
DR95_2188 | papD | DR95_2188 | DR95_1667 | papC N-terminal domain protein. | Chaperone protein papD. | 0.858 |
DR95_2188 | papD-4 | DR95_2188 | DR95_71 | papC N-terminal domain protein. | Chaperone protein papD. | 0.858 |
DR95_2188 | pmfA | DR95_2188 | DR95_73 | papC N-terminal domain protein. | Major fimbrial subunit. | 0.705 |
DR95_2808 | papC-3 | DR95_2808 | DR95_72 | impA-related N-terminal family protein. | Outer membrane usher protein papC. | 0.600 |
DR95_2808 | pmfA | DR95_2808 | DR95_73 | impA-related N-terminal family protein. | Major fimbrial subunit. | 0.703 |
elfC_4 | DR95_2187 | DR95_3326 | DR95_2187 | papC N-terminal domain protein. | Fimbrial family protein. | 0.822 |
elfC_4 | papD | DR95_3326 | DR95_1667 | papC N-terminal domain protein. | Chaperone protein papD. | 0.858 |
elfC_4 | papD-4 | DR95_3326 | DR95_71 | papC N-terminal domain protein. | Chaperone protein papD. | 0.858 |
elfC_4 | pmfA | DR95_3326 | DR95_73 | papC N-terminal domain protein. | Major fimbrial subunit. | 0.707 |
papC | DR95_2187 | DR95_3003 | DR95_2187 | Outer membrane usher protein papC. | Fimbrial family protein. | 0.768 |
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