STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpFahpF: alkyl hydroperoxide reductase subunit F. (521 aa)    
Predicted Functional Partners:
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.980
tsaA_1
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
  
  
 0.817
degQ
degP_htrA_DO: peptidase Do family protein; Belongs to the peptidase S1C family.
      
 0.565
katA
Catalase; Belongs to the catalase family.
  
  
 0.548
trxB
TRX_reduct: thioredoxin-disulfide reductase.
 
  
0.511
maeA
NAD-dependent malic enzyme.
      
 0.497
dps
DNA protection during starvation protein; Belongs to the Dps family.
  
  
 0.492
narH
narH: nitrate reductase, beta subunit.
      
 0.489
narG
narG: nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
      
 0.476
glyS
glycyl-tRNA synthetase beta subunit.
      
 0.447
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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