STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR95_81Putative membrane protein. (211 aa)    
Predicted Functional Partners:
DR95_406
Tape_meas_nterm: tape measure domain protein.
  
     0.654
yijD
Inner membrane protein yijD.
  
     0.644
priC
Primosomal replication priB and priC family protein.
  
     0.563
DR95_3299
Hypothetical protein; Opacity-associated A N-terminal motif family protein.
  
     0.554
thiK
Phosphotransferase enzyme family protein; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.551
DR95_2254
Hypothetical protein.
  
     0.524
glrK
Putative sensor-like histidine kinase yfhK.
 
     0.511
fliT
Flagellar protein FliT.
  
     0.480
acsC
Cellulose synthase operon C family protein.
  
     0.473
DR95_2873
cobQ/CobB/MinD/ParA nucleotide binding domain protein.
  
     0.456
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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