STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cra_1Fruct_sucro_rep: D-fructose-responsive transcription factor family protein. (336 aa)    
Predicted Functional Partners:
gntR_1
Periplasmic binding s and sugar binding domain of LacI family protein.
  
     0.772
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.707
gltB
Glutamine amidotransferases class-II family protein.
    
 
 0.646
sacX
PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component.
  
  
 0.605
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM.
   
 
 0.599
ptsH
Phosphocarrier protein HPr.
   
 
 0.586
rhaR
Helix-turn-helix domain protein.
  
    0.552
yidP
Hypothetical protein.
  
   
 0.517
kdgK_4
pfkB carbohydrate kinase family protein.
 
  
 0.403
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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