Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DR95_829Tripartite tricarboxylate transporter receptor family protein. (314 aa)    
Predicted Functional Partners:
DR95_831
Tripartite tricarboxylate transporter TctA family protein.
 
  
 0.960
DR95_2631
Tripartite tricarboxylate transporter TctA family protein.
 
  
 0.908
DR95_830
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.855
rbsK_1
pfkB carbohydrate kinase family protein.
       0.780
siaT_1
TRAP_fused: TRAP transporter, 4TM/12TM fusion family protein.
  
     0.717
DR95_688
TRAP_TAXI: TRAP transporter solute receptor, TAXI family protein.
  
   
 0.705
DR95_2630
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.581
DR95_1757
gneg_AbrB_dup: membrane AbrB duplication domain protein.
 
    0.489
iclR
Acetate operon repressor.
 
  
 0.477
ygaZ
azlC family protein.
       0.402
Your Current Organism:
Proteus vulgaris
NCBI taxonomy Id: 585
Other names: ATCC 29905, CCUG 35382, CCUG 39507, CDC PR1, CIP 104989, DSM 13387, LMG 16708, LMG:16708, NCTC 13145, P. vulgaris, strain PR 1
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