STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_082310DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2353 aa)    
Predicted Functional Partners:
PKH_010620
DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative.
    
 0.993
PKH_041430
DNA-directed RNA polymerase I subunit, putative.
    
 0.993
PKH_143100
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.993
PKH_061170
DNA-directed RNA polymerase II subunit RPB7, putative.
   
 0.993
PKH_020320
DNA-directed RNA polymerase II subunit RPB9, putative.
    
 0.993
PKH_072020
DNA-directed RNA polymerase II subunit RPB3, putative.
    
 0.993
PKH_121180
DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative.
    
 0.993
PKH_040430
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.993
PKH_083690
Dna-directed rna polymerase subunit i, putative.
    
 0.993
PKH_110590
DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative.
    
 0.993
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.