STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhaVConserved hypothetical protein; Homologs of previously reported genes of unknown function. (154 aa)    
Predicted Functional Partners:
sohA
Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.999
yoeB
Toxin of the YoeB-YefM toxin-antitoxin system; Function experimentally demonstrated in the studied species; factor.
  
   
 0.839
yafQ
Toxin of the YafQ-DinJ toxin-antitoxin system; Function experimentally demonstrated in the studied species; factor.
      
 0.807
yefM
Antitoxin of the YoeB-YefM toxin-antitoxin system; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
   
 0.796
relE
Toxin of the RelE-RelB toxin-antitoxin system; Function experimentally demonstrated in the studied species; extrachromosomal origin.
  
   
 0.744
chpB
Toxin of the ChpB-ChpS toxin-antitoxin system; Function experimentally demonstrated in the studied species; factor.
  
   
 0.724
dinJ
Antitoxin of YafQ-DinJ toxin-antitoxin system; Function experimentally demonstrated in the studied species; putative factor.
 
   
 0.691
chpA
Toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease; Function experimentally demonstrated in the studied species; enzyme.
  
   
 0.656
yjiK
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.
  
     0.598
frvR
Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.561
Your Current Organism:
Escherichia coli IAI1
NCBI taxonomy Id: 585034
Other names: E. coli IAI1, Escherichia coli str. IAI1, Escherichia coli strain IAI1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.